ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 61853.00 85.14 362.29 93.76 MIR181A1HG-212 lncRNA sigmoid colon (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 73.00 0.10 0.43 100.0 MIR181A1HG-212 lncRNA sigmoid colon (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 38.00 55.07 0.22 100.0 C19orf48P-218 lncRNA sigmoid colon (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1482.00 69.32 8.68 92.86 SNHG18-220 lncRNA sigmoid colon (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 270.00 23.44 1.58 100.0 ENST00000817026 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 17.00 0.26 0.10 100.0 ENST00000823279 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 116.52 1.81 0.68 20.13 ENST00000823279 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 75.27 1.17 0.44 35.34 ENST00000823279 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 502.10 7.81 2.94 61.76 ENST00000823279 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 177.80 2.77 1.04 23.55 ENST00000823279 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 105.00 1.63 0.62 84.68 ENST00000823279 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 162.22 2.52 0.95 34.96 ENST00000823279 lncRNA sigmoid colon (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 456.30 7.10 2.67 75.8 ENST00000823801 lncRNA sigmoid colon (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 4673.00 66.98 27.37 77.55 ENST00000827714 lncRNA sigmoid colon (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 1353.00 19.39 7.92 22.45 ENST00000827714 lncRNA sigmoid colon (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 138.00 1.11 0.81 100.0 GAS5-377 lncRNA sigmoid colon (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 11.00 0.09 0.06 100.0 GAS5-377 lncRNA sigmoid colon (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1048.00 8.46 6.14 100.0 GAS5-377 lncRNA sigmoid colon (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 10755.00 86.85 63.00 100.0 GAS5-377 lncRNA sigmoid colon (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 46.00 1.39 0.27 100.0 ZFAS1-238 lncRNA sigmoid colon (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 32.00 0.97 0.19 100.0 ZFAS1-238 lncRNA sigmoid colon (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1355.00 40.99 7.94 100.0 ZFAS1-238 lncRNA sigmoid colon (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 6602.00 93.05 38.67 100.0 ZFAS1-242 lncRNA sigmoid colon (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 776.00 42.92 4.55 100.0 ENST00000837997 lncRNA sigmoid colon (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 468.00 25.88 2.74 100.0 ENST00000837997 lncRNA sigmoid colon (Tissue)