ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 759.00 4.57 4.45 100.0 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 89.00 0.54 0.52 100.0 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 11190.00 67.37 65.54 94.67 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 470.00 2.83 2.75 100.0 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 4.00 1.65 0.02 100.0 ENST00000772672 lncRNA sigmoid colon (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 208.00 22.73 1.22 100.0 ENST00000773843 lncRNA sigmoid colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 311319.00 56.84 1823.50 93.27 SNHG12-223 lncRNA sigmoid colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 235007.00 42.90 1376.51 98.63 SNHG12-223 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 18835.00 56.43 110.32 100.0 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 132.00 0.40 0.77 32.75 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 735.00 2.20 4.31 100.0 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 303.70 0.91 1.78 43.39 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 311.47 0.93 1.82 45.01 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 435.52 1.30 2.55 39.27 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 6133.00 18.37 35.92 83.77 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 270.00 0.81 1.58 100.0 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 332.00 85.35 1.94 88.06 MIR155HG-205 lncRNA sigmoid colon (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 36.00 60.00 0.21 100.0 ENST00000784740 lncRNA sigmoid colon (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 64.00 1.44 0.37 100.0 ENST00000785178 lncRNA sigmoid colon (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 379.00 10.29 2.22 85.55 ENST00000786284 lncRNA sigmoid colon (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1185.00 32.17 6.94 100.0 ENST00000786284 lncRNA sigmoid colon (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 64.00 1.74 0.37 17.02 ENST00000786284 lncRNA sigmoid colon (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 3861.79 45.09 22.62 55.7 ENST00000797550 lncRNA sigmoid colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2711.66 31.66 15.88 39.11 ENST00000797550 lncRNA sigmoid colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 215.00 2.51 1.26 58.42 ENST00000797550 lncRNA sigmoid colon (Tissue)