ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 12425.00 62.70 72.78 91.25 MIR30D-201 miRNA sigmoid colon (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 776.00 14.10 4.55 94.87 MIR126-201 miRNA sigmoid colon (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 4564.00 82.95 26.73 100.0 MIR126-201 miRNA sigmoid colon (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 92.00 54.44 0.54 100.0 MIR374A-201 miRNA sigmoid colon (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 3.00 100.00 0.02 100.0 MIR31-201 miRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 634.00 0.58 3.71 60.5 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 11.00 0.01 0.06 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 6.00 0.01 0.04 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 129.00 0.12 0.76 44.48 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 67.00 0.06 0.39 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 225.00 0.21 1.32 97.4 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 641.63 0.59 3.76 56.18 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 940.00 0.86 5.51 46.08 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 67.00 0.06 0.39 65.05 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 39.00 0.04 0.23 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 4567.00 4.17 26.75 80.59 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 363.77 0.33 2.13 45.19 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 78.00 9.26 0.46 100.0 Y_RNA.14-201 misc RNA sigmoid colon (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 3.00 1.03 0.02 100.0 RNU5E-1-201 snRNA sigmoid colon (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 29.00 6.73 0.17 100.0 SNORA31-201 snoRNA sigmoid colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 60.00 1.95 0.35 27.15 RNA5SP389-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 69.00 2.24 0.40 69.7 RNA5SP389-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 137.00 4.44 0.80 100.0 RNA5SP389-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 289.07 2.27 1.69 59.48 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 2265.00 17.78 13.27 73.42 RNU5A-1-201 snRNA sigmoid colon (Tissue)