ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 655.00 8.42 3.84 47.26 MIR130A-201 miRNA sigmoid colon (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 209226.00 98.09 1225.51 98.94 MIRLET7F2-201 miRNA sigmoid colon (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 91.00 75.21 0.53 100.0 MIR652-201 miRNA sigmoid colon (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 4.00 80.00 0.02 100.0 MIR653-201 miRNA sigmoid colon (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1552.00 80.08 9.09 100.0 MIR140-201 miRNA sigmoid colon (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 91.00 27.91 0.53 65.94 MIR106B-201 miRNA sigmoid colon (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 8.00 2.45 0.05 100.0 MIR106B-201 miRNA sigmoid colon (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 924.00 71.02 5.41 100.0 SNORD41-201 snoRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 2141.00 38.23 12.54 64.08 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 160.00 2.86 0.94 100.0 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 244.00 4.36 1.43 60.25 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 842.00 28.48 4.93 100.0 MT-TV-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 47.00 0.82 0.28 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 25.00 0.43 0.15 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 902.00 15.67 5.28 93.57 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 446.00 7.75 2.61 74.71 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 9.00 0.16 0.05 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 138.00 2.40 0.81 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 88.00 1.53 0.52 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 274.00 28.57 1.60 92.26 MT-TI-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 197.00 20.54 1.15 100.0 MT-TI-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 4029.70 9.93 23.60 47.36 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 3.00 0.01 0.02 100.0 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 25232.00 62.18 147.79 92.49 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 3520.59 8.68 20.62 65.38 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)