ENCFF590YKZ

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 307.00 59.04 6.00 100.0 SNORD114-15-201 snoRNA GM23248 (Cell line)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 46.00 69.70 0.90 100.0 ENST00000364722 snoRNA GM23248 (Cell line)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 98.00 48.28 1.92 100.0 SNORD113-3-201 snoRNA GM23248 (Cell line)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 485.00 65.45 9.48 100.0 SNORD52-201 snoRNA GM23248 (Cell line)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 182.00 28.53 3.56 56.35 SNORD117-201 snoRNA GM23248 (Cell line)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 141.00 22.10 2.76 64.68 SNORD117-201 snoRNA GM23248 (Cell line)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 108.00 3.67 2.11 100.0 SNORD114-3-201 snoRNA GM23248 (Cell line)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 2156.00 73.28 42.14 97.25 SNORD114-3-201 snoRNA GM23248 (Cell line)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 427.00 14.51 8.35 100.0 SNORD114-3-201 snoRNA GM23248 (Cell line)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 211.00 34.48 4.12 100.0 RNA5SP298-201 rRNA pseudogene GM23248 (Cell line)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 1.00 100.00 0.02 100.0 SNORD115-10-201 snoRNA GM23248 (Cell line)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 829.00 77.26 16.20 100.0 SNORD113-9-201 snoRNA GM23248 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 238.00 23.15 4.65 100.0 SNORD38A-201 snoRNA GM23248 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 18.00 1.75 0.35 100.0 SNORD38A-201 snoRNA GM23248 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 683.00 66.44 13.35 100.0 SNORD38A-201 snoRNA GM23248 (Cell line)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 9344.00 84.81 182.61 94.41 SNORD114-20-201 snoRNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 8.00 0.94 0.16 100.0 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 122.00 14.29 2.38 65.95 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 20.00 2.34 0.39 100.0 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 54.00 6.32 1.06 50.47 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 63.00 7.38 1.23 78.75 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 1.00 0.12 0.02 100.0 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 208.00 24.36 4.07 79.69 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 5453.00 55.87 106.57 100.0 SNORD114-22-201 snoRNA GM23248 (Cell line)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 3778.00 38.71 73.84 94.14 SNORD114-22-201 snoRNA GM23248 (Cell line)