ENCFF590YKZ

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 65.00 1.21 1.27 85.53 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 756.00 14.02 14.77 78.1 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 290.00 5.38 5.67 100.0 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 129.00 2.39 2.52 46.07 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 69.00 1.28 1.35 65.71 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 239.00 4.43 4.67 70.71 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 7.00 0.13 0.14 100.0 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 27.00 0.50 0.53 42.86 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 275.00 5.10 5.37 38.62 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 2.48 0.05 0.05 62.0 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 567.83 10.53 11.10 51.39 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 161.00 2.99 3.15 100.0 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 645.78 11.97 12.62 61.56 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 2.27 0.04 0.04 3.43 RNU5A-1-201 snRNA GM23248 (Cell line)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 1690.00 94.62 33.03 100.0 SNORD114-14-201 snoRNA GM23248 (Cell line)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 41.00 4.93 0.80 100.0 SNORD104-201 snoRNA GM23248 (Cell line)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 14.00 1.68 0.27 100.0 SNORD104-201 snoRNA GM23248 (Cell line)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 90.00 9.44 1.76 90.0 RNA5SP358-201 rRNA pseudogene GM23248 (Cell line)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 1956.00 40.19 38.23 90.26 RNA5SP145-201 rRNA pseudogene GM23248 (Cell line)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 7.00 20.59 0.14 100.0 Y_RNA.105-201 misc RNA GM23248 (Cell line)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 8.00 18.60 0.16 100.0 RNY4P9-201 misc RNA GM23248 (Cell line)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 28.00 1.44 0.55 100.0 RNU5B-1-201 snRNA GM23248 (Cell line)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 99.00 5.07 1.93 100.0 RNU5B-1-201 snRNA GM23248 (Cell line)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 346.00 17.73 6.76 100.0 RNU5B-1-201 snRNA GM23248 (Cell line)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 111.00 5.69 2.17 100.0 RNU5B-1-201 snRNA GM23248 (Cell line)