ENCFF590YKZ

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 80.00 48.78 1.56 100.0 ENST00000837997 lncRNA GM23248 (Cell line)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 279.00 69.23 5.45 79.94 ENST00000839036 lncRNA GM23248 (Cell line)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 606.00 70.30 11.84 100.0 ENST00000849527 lncRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 233.00 47.84 4.55 94.33 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 26.00 5.34 0.51 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 37.00 0.30 0.72 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 429.00 81.87 8.38 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 12.00 2.29 0.23 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 22.00 17.74 0.43 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 87.00 10.13 1.70 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 156.00 43.94 3.05 85.71 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 171.00 1.38 3.34 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 7.00 18.92 0.14 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 86.00 16.04 1.68 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 50.00 9.33 0.98 90.91 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 10.00 1.87 0.20 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 342.00 72.92 6.68 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 399.00 6.99 7.80 85.44 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 11.00 0.19 0.21 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 121.00 2.12 2.36 84.03 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 355.00 6.22 6.94 36.45 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 30.00 0.53 0.59 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 87.00 1.52 1.70 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 3.00 20.00 0.06 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 180.00 1.49 3.52 94.24 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA GM23248 (Cell line)