ENCFF590YKZ

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 20.00 54.05 0.39 100.0 MIR369-201 miRNA GM23248 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 21.00 40.38 0.41 100.0 MIR425-201 miRNA GM23248 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 12.00 23.08 0.23 100.0 MIR425-201 miRNA GM23248 (Cell line)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 150.00 62.24 2.93 100.0 MIR210-201 miRNA GM23248 (Cell line)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 42.00 97.67 0.82 97.67 MIR378A-201 miRNA GM23248 (Cell line)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 45.00 62.50 0.88 100.0 MIR361-201 miRNA GM23248 (Cell line)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 176.00 80.73 3.44 88.44 MIR101-2-201 miRNA GM23248 (Cell line)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 10.00 4.59 0.20 30.3 MIR101-2-201 miRNA GM23248 (Cell line)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 5.00 45.45 0.10 100.0 MIR323A-201 miRNA GM23248 (Cell line)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 10735.00 98.73 209.80 99.39 MIR26A1-201 miRNA GM23248 (Cell line)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 16.00 59.26 0.31 100.0 MIR129-2-201 miRNA GM23248 (Cell line)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 18.00 94.74 0.35 100.0 MIR342-201 miRNA GM23248 (Cell line)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 13.00 0.43 0.25 100.0 MIR148A-201 miRNA GM23248 (Cell line)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 2635.00 86.22 51.50 87.02 MIR148A-201 miRNA GM23248 (Cell line)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 396.00 97.54 7.74 100.0 MIR410-201 miRNA GM23248 (Cell line)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 911.00 94.60 17.80 100.0 MIR409-201 miRNA GM23248 (Cell line)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 7.00 0.73 0.14 100.0 MIR409-201 miRNA GM23248 (Cell line)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 1494.00 99.60 29.20 100.0 MIR411-201 miRNA GM23248 (Cell line)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 592.00 96.73 11.57 97.85 MIR26B-201 miRNA GM23248 (Cell line)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 287.00 85.67 5.61 94.1 MIR148B-201 miRNA GM23248 (Cell line)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 559.00 97.05 10.92 100.0 MIRLET7G-201 miRNA GM23248 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 143.00 96.62 2.79 99.31 MIR30D-201 miRNA GM23248 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 1.00 0.68 0.02 50.0 MIR30D-201 miRNA GM23248 (Cell line)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 3.00 18.75 0.06 100.0 MIR126-201 miRNA GM23248 (Cell line)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 13.00 81.25 0.25 100.0 MIR126-201 miRNA GM23248 (Cell line)