ENCFF583SZV

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR573RGL
Description: Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 929.00 0.12 4.00 65.84 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 109.00 0.01 0.47 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 420.00 0.06 1.81 89.74 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 164483.00 22.07 707.51 47.82 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 92.00 0.01 0.40 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 369.00 69.10 1.59 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 45.00 0.00 0.19 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 348.00 16.35 1.50 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 448.00 21.05 1.93 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 200.00 8.17 0.86 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 9.00 0.10 0.04 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 33.00 0.00 0.14 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 159.00 0.02 0.68 8.17 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 3452.00 38.57 14.85 62.71 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 3167.00 35.39 13.62 47.85 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 94.00 3.74 0.40 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1241.00 0.17 5.34 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 502647.00 67.87 2162.08 93.35 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 902.00 39.15 3.88 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 13.00 0.99 0.06 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 126.00 0.22 0.54 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 180.00 0.84 0.77 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 120.00 0.56 0.52 24.9 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 154.00 0.72 0.66 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 74.00 0.35 0.32 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)