ENCFF583SZV

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR573RGL
Description: Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 14.00 53.85 0.06 100.0 MEG8-261 lncRNA stomach (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 254.00 44.33 1.09 100.0 NR2F2-AS1-327 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 13628.00 42.85 58.62 100.0 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 626.00 1.97 2.69 34.57 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 509.00 1.60 2.19 30.05 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 1185.00 3.73 5.10 51.08 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 9418.00 29.61 40.51 100.0 ENST00000747675 lncRNA stomach (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 8338.00 15.94 35.87 100.0 SNHG26-250 lncRNA stomach (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 34310.00 65.60 147.58 90.65 SNHG26-250 lncRNA stomach (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 329.00 22.61 1.42 100.0 LINC02422-207 lncRNA stomach (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 96.00 6.68 0.41 100.0 ENST00000753088 lncRNA stomach (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 167.00 11.61 0.72 100.0 ENST00000753088 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 34.00 0.07 0.15 100.0 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 504.35 1.04 2.17 17.23 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 2658.00 5.49 11.43 100.0 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 1573.00 3.25 6.77 100.0 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 319.00 0.66 1.37 100.0 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 5636.11 11.64 24.24 25.75 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 17506.93 36.17 75.30 78.9 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 1858.72 3.84 8.00 39.91 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1408.01 2.91 6.06 72.8 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 3996.25 8.26 17.19 67.07 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 32.00 6.25 0.14 100.0 ENST00000756452 lncRNA stomach (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 418.00 4.42 1.80 100.0 ENST00000760093 lncRNA stomach (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 5687.00 60.19 24.46 100.0 ENST00000760093 lncRNA stomach (Tissue)