ENCFF583SZV

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR573RGL
Description: Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 1725.00 50.60 7.42 100.0 MEG8-234 lncRNA stomach (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 365.00 61.14 1.57 100.0 MEG8-240 lncRNA stomach (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 58.00 34.94 0.25 100.0 SNHG14-306 lncRNA stomach (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 3.00 0.71 0.01 100.0 ENST00000666735 lncRNA stomach (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 26.00 6.19 0.11 100.0 ENST00000666735 lncRNA stomach (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 2853.00 83.03 12.27 100.0 MEG8-242 lncRNA stomach (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 89714.00 97.86 385.90 99.82 MEG8-244 lncRNA stomach (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 410.00 0.45 1.76 100.0 MEG8-244 lncRNA stomach (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 531.00 0.58 2.28 100.0 MEG8-244 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 121.00 0.01 0.52 100.0 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 973.00 0.10 4.19 100.0 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 18.00 0.00 0.08 100.0 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 15473.00 1.56 66.56 99.38 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 2042.87 0.21 8.79 67.11 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 2961.00 0.30 12.74 69.85 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 659245.00 66.36 2835.67 99.64 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1509.00 0.15 6.49 78.19 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 64994.00 6.54 279.56 99.09 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 12289.00 1.24 52.86 100.0 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 61190.00 6.16 263.20 99.81 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 386.00 0.04 1.66 100.0 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 83.00 0.01 0.36 100.0 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 575.00 0.06 2.47 100.0 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 790.00 0.08 3.40 100.0 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 549.00 0.06 2.36 100.0 SNHG1-248 lncRNA stomach (Tissue)