ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 284.00 0.49 2.37 100.0 RNU5A-1-201 snRNA right lobe of liver (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 1856.43 3.22 15.48 32.96 RNU5A-1-201 snRNA right lobe of liver (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 6060.00 10.53 50.55 64.2 RNU5A-1-201 snRNA right lobe of liver (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 5426.00 9.43 45.26 60.26 RNU5A-1-201 snRNA right lobe of liver (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 6459.00 11.22 53.87 62.58 RNU5A-1-201 snRNA right lobe of liver (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 208.00 92.04 1.73 100.0 SNORD114-14-201 snoRNA right lobe of liver (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1528.00 3.23 12.74 100.0 SNORD104-201 snoRNA right lobe of liver (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 79.00 0.17 0.66 100.0 SNORD104-201 snoRNA right lobe of liver (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 196336.00 66.30 1637.62 74.16 RNA5SP358-201 rRNA pseudogene right lobe of liver (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 49.00 1.02 0.41 45.37 RNA5SP145-201 rRNA pseudogene right lobe of liver (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 1.00 11.11 0.01 100.0 Y_RNA.105-201 misc RNA right lobe of liver (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 3.00 0.20 0.03 100.0 RNY4P9-201 misc RNA right lobe of liver (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 1423.00 11.74 11.87 100.0 RNU5B-1-201 snRNA right lobe of liver (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 221.00 1.82 1.84 100.0 RNU5B-1-201 snRNA right lobe of liver (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 4427.00 36.53 36.93 100.0 RNU5B-1-201 snRNA right lobe of liver (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 28.00 1.21 0.23 96.55 RNY4P27-201 misc RNA right lobe of liver (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 3.00 0.13 0.03 75.0 RNY4P27-201 misc RNA right lobe of liver (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 73.00 6.66 0.61 100.0 Y_RNA.136-201 misc RNA right lobe of liver (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 3800.00 94.67 31.70 98.86 SNORD114-25-201 snoRNA right lobe of liver (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 3971.00 96.34 33.12 100.0 SNORD113-7-201 snoRNA right lobe of liver (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 21.00 21.21 0.18 100.0 Y_RNA.181-201 misc RNA right lobe of liver (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 19.00 0.98 0.16 100.0 RNY1-201 misc RNA right lobe of liver (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 355.53 18.29 2.97 48.11 RNY1-201 misc RNA right lobe of liver (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 300.81 15.47 2.51 50.9 RNY1-201 misc RNA right lobe of liver (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 265.00 13.63 2.21 100.0 RNY1-201 misc RNA right lobe of liver (Tissue)