ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 1211.00 0.97 10.10 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 2021.00 1.62 16.86 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 27.00 0.02 0.23 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 371.00 0.08 3.09 69.48 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 542.00 0.11 4.52 59.96 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 2018.00 0.43 16.83 95.01 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 12460.00 50.11 103.93 90.88 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 3275.00 94.33 27.32 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 3168.00 53.26 26.42 83.65 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 454.00 94.39 3.79 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 4.00 0.01 0.03 4.0 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 96.00 0.25 0.80 96.0 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 21385.00 55.74 178.37 91.64 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 1235.16 22.23 10.30 87.85 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 723.00 13.01 6.03 85.97 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 331.22 5.96 2.76 25.19 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 68611.00 91.34 572.28 95.8 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 162.00 2.14 1.35 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1629.00 12.80 13.59 61.63 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 1952.00 0.70 16.28 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 1645.00 0.28 13.72 63.96 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 14732.00 86.28 122.88 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 197.00 1.03 1.64 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 293447.00 94.18 2447.61 99.61 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 88.00 0.11 0.73 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA right lobe of liver (Tissue)