ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 11049.00 75.25 92.16 100.0 SNHG29-232 lncRNA right lobe of liver (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 309.00 2.10 2.58 100.0 SNHG29-232 lncRNA right lobe of liver (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 1285.00 8.75 10.72 100.0 SNHG29-232 lncRNA right lobe of liver (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 28.00 0.19 0.23 100.0 SNHG29-232 lncRNA right lobe of liver (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 1.00 0.01 0.01 100.0 SNHG29-232 lncRNA right lobe of liver (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 79.00 4.59 0.66 100.0 SNHG14-234 lncRNA right lobe of liver (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 26.00 1.51 0.22 100.0 SNHG14-234 lncRNA right lobe of liver (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 15.00 0.04 0.13 0.15 ENST00000655317 lncRNA right lobe of liver (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 1689.00 4.48 14.09 100.0 ENST00000655317 lncRNA right lobe of liver (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 18492.00 49.00 154.24 75.96 ENST00000655317 lncRNA right lobe of liver (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 2359.00 4.03 19.68 89.97 LINC01962-202 lncRNA right lobe of liver (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 46391.00 79.33 386.94 100.0 LINC01962-202 lncRNA right lobe of liver (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 2748.00 4.70 22.92 100.0 LINC01962-202 lncRNA right lobe of liver (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 1582.00 89.33 13.20 100.0 MEG8-228 lncRNA right lobe of liver (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 386.00 2.23 3.22 100.0 LIMD1-AS1-204 lncRNA right lobe of liver (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 2501.00 14.45 20.86 94.09 LIMD1-AS1-204 lncRNA right lobe of liver (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 735.00 24.33 6.13 84.68 MIR99AHG-262 lncRNA right lobe of liver (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1602.00 53.03 13.36 100.0 MIR99AHG-262 lncRNA right lobe of liver (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 30.00 62.50 0.25 100.0 MIR9-2HG-225 lncRNA right lobe of liver (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 352.00 54.91 2.94 100.0 MEG8-233 lncRNA right lobe of liver (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 36.00 5.62 0.30 100.0 MEG8-233 lncRNA right lobe of liver (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 124.00 32.72 1.03 100.0 MEG8-234 lncRNA right lobe of liver (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 58.00 15.30 0.48 100.0 MEG8-234 lncRNA right lobe of liver (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 164.00 52.56 1.37 100.0 MEG8-240 lncRNA right lobe of liver (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 87.00 37.99 0.73 100.0 SNHG14-306 lncRNA right lobe of liver (Tissue)