ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 146.00 6.53 1.22 100.0 SNHG14-224 lncRNA right lobe of liver (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 445.00 19.91 3.71 81.2 SNHG14-224 lncRNA right lobe of liver (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 309.00 13.83 2.58 74.64 SNHG14-224 lncRNA right lobe of liver (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 10279.80 5.15 85.74 46.18 5S_rRNA.20-201 rRNA pseudogene right lobe of liver (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 3389.00 28.48 28.27 100.0 HSPA9-211 retained intron right lobe of liver (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 3184.00 26.76 26.56 66.61 HSPA9-211 retained intron right lobe of liver (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 3783.00 54.93 31.55 100.0 DNM3OS-205 lncRNA right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 676.00 0.18 5.64 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 1511.00 0.40 12.60 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 5069.00 1.35 42.28 91.91 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 177.00 0.05 1.48 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 34.00 0.01 0.28 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 164.00 0.04 1.37 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 247115.00 65.70 2061.16 99.89 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1069.00 0.28 8.92 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 12535.00 3.33 104.55 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1786.00 0.47 14.90 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 807.00 0.21 6.73 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 11941.00 3.17 99.60 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 32.00 0.01 0.27 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 558.00 0.15 4.65 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1321.00 0.35 11.02 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 11033.00 2.93 92.03 78.39 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 7543.00 2.01 62.92 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 24.00 0.01 0.20 100.0 GAS5-230 retained intron right lobe of liver (Tissue)