ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 753.00 0.06 5.09 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 808199.00 63.54 5463.15 99.84 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 340.00 0.03 2.30 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 1767.00 0.14 11.94 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 188.00 0.01 1.27 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 383.00 0.03 2.59 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 978.00 0.08 6.61 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 12.00 0.00 0.08 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 145.00 0.01 0.98 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 915.00 0.07 6.19 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 4476.00 0.35 30.26 79.26 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 1211.00 0.10 8.19 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 172.00 0.01 1.16 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 80.00 0.01 0.54 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 2060.00 0.16 13.92 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 429996.00 33.80 2906.63 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 2.00 0.00 0.01 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 9.00 7.89 0.06 100.0 FTX-219 lncRNA thyroid gland (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 65.00 57.02 0.44 90.28 FTX-219 lncRNA thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 112.00 1.65 0.76 88.89 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 121.00 1.79 0.82 44.32 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 3294.00 48.62 22.27 84.4 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 152.00 2.24 1.03 55.68 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 1323.00 19.53 8.94 57.57 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 365.00 5.39 2.47 100.0 CTC1-214 protein coding thyroid gland (Tissue)