ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 2484.00 7.33 16.79 100.0 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 438.00 1.29 2.96 43.93 RABGGTB-213 protein coding CDS not defined thyroid gland (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 508.00 15.04 3.43 100.0 GNL3-211 retained intron thyroid gland (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 2681.00 79.37 18.12 100.0 GNL3-211 retained intron thyroid gland (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 57.00 31.84 0.39 100.0 RPL5-205 retained intron thyroid gland (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 17.00 1.91 0.11 100.0 ZBED9-AS1-201 lncRNA thyroid gland (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 1674.00 91.83 11.32 100.0 RPS3A-206 retained intron thyroid gland (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 14273.00 97.40 96.48 100.0 COX7C-203 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1992.00 5.76 13.47 100.0 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 6321.50 18.27 42.73 42.35 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 12301.87 35.56 83.16 68.83 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 10832.00 31.31 73.22 99.56 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 226.00 13.36 1.53 100.0 RACK1-230 retained intron thyroid gland (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 3.00 0.18 0.02 16.67 RACK1-230 retained intron thyroid gland (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 204.00 2.71 1.38 100.0 RNA5SP486-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 3527.00 89.36 23.84 100.0 SCARNA5-201 scaRNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 199111.00 74.85 1345.92 92.65 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 18999.00 7.14 128.43 98.32 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 707.00 0.27 4.78 100.0 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1296.00 0.49 8.76 76.19 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 1922.00 0.72 12.99 62.65 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 295.00 0.11 1.99 100.0 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 17198.00 6.47 116.25 52.14 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 127.00 0.05 0.86 100.0 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 93.00 0.03 0.63 53.14 RNY4-201 misc RNA thyroid gland (Tissue)