ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 1015.00 4.18 5.06 70.63 RNA5S12-201 rRNA uterus (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 1284.00 5.28 6.41 76.07 RNA5S12-201 rRNA uterus (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 184.00 0.76 0.92 100.0 RNA5S12-201 rRNA uterus (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 217.00 0.89 1.08 34.94 RNA5S12-201 rRNA uterus (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 231.58 0.95 1.16 52.75 RNA5S12-201 rRNA uterus (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 4.00 0.02 0.02 100.0 RNA5S12-201 rRNA uterus (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 15.00 0.06 0.07 100.0 RNA5S12-201 rRNA uterus (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 147.14 0.61 0.73 46.42 RNA5S12-201 rRNA uterus (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 141.00 0.58 0.70 87.58 RNA5S12-201 rRNA uterus (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 19.00 0.08 0.09 100.0 RNA5S12-201 rRNA uterus (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 66.00 0.27 0.33 68.75 RNA5S12-201 rRNA uterus (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 124.00 28.77 0.62 100.0 Y_RNA.14-201 misc RNA uterus (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 1.00 3.23 0.00 100.0 RNU5E-1-201 snRNA uterus (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 50.00 7.24 0.25 100.0 SNORA31-201 snoRNA uterus (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 9.00 0.96 0.04 31.03 RNA5SP389-201 rRNA pseudogene uterus (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 62.00 6.65 0.31 83.78 RNA5SP389-201 rRNA pseudogene uterus (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 35.00 3.75 0.17 100.0 RNA5SP389-201 rRNA pseudogene uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 22.00 0.18 0.11 100.0 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 447.05 3.56 2.23 56.52 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1278.00 10.19 6.38 75.53 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1225.00 9.76 6.11 58.17 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1474.00 11.75 7.35 64.99 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 396.55 3.16 1.98 61.58 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 2801.00 22.33 13.97 73.94 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 2093.00 16.68 10.44 67.84 RNU5A-1-201 snRNA uterus (Tissue)