ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 18.00 0.00 0.09 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 3713.00 0.33 18.52 98.59 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 2075.43 0.19 10.35 71.08 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 2284.00 0.20 11.40 77.29 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 746378.00 66.55 3723.73 99.54 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1159.00 0.10 5.78 81.85 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 43715.00 3.90 218.10 98.38 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 5733.00 0.51 28.60 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 120287.00 10.72 600.12 99.88 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 775.00 0.07 3.87 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 54.00 0.00 0.27 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 514.00 0.05 2.56 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 750.00 0.07 3.74 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 450.00 0.04 2.25 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 14984.00 1.34 74.76 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 179.00 0.02 0.89 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1111.00 0.10 5.54 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 59442.00 5.30 296.56 74.96 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 6.00 0.00 0.03 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 5359.00 0.48 26.74 88.14 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 44.00 0.00 0.22 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 38.00 0.00 0.19 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 25190.00 2.25 125.67 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1662.00 0.15 8.29 72.64 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 918.72 0.08 4.58 31.46 SNHG1-248 lncRNA uterus (Tissue)