ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 56.00 1.34 0.28 100.0 VMP1-217 retained intron uterus (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 12.00 0.29 0.06 100.0 VMP1-217 retained intron uterus (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 2093.00 50.08 10.44 57.2 VMP1-217 retained intron uterus (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 299.00 22.88 1.49 100.0 C19orf48P-203 retained intron uterus (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 14.00 1.07 0.07 100.0 C19orf48P-203 retained intron uterus (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 943598.00 78.33 4707.67 79.68 CARMN-209 lncRNA uterus (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 36.00 44.44 0.18 100.0 PPFIA1P1-201 processed pseudogene uterus (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 932.00 46.25 4.65 100.0 SNORD114-21-201 snoRNA uterus (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 726.00 36.03 3.62 100.0 SNORD114-21-201 snoRNA uterus (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 1894.00 97.58 9.45 100.0 MIR98-201 miRNA uterus (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 158.00 66.11 0.79 100.0 SNORD113-5-201 snoRNA uterus (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 43.00 86.00 0.21 100.0 MIR15A-201 miRNA uterus (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 126.00 58.88 0.63 100.0 SNHG21-206 retained intron uterus (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 30649.00 48.78 152.91 98.34 MIR486-1-201 miRNA uterus (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 62385.00 88.43 311.24 99.99 NOP56-219 retained intron uterus (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 273.00 0.39 1.36 100.0 NOP56-219 retained intron uterus (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 386.00 0.55 1.93 100.0 NOP56-219 retained intron uterus (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 2320.00 3.29 11.57 45.98 NOP56-219 retained intron uterus (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 2932.13 35.38 14.63 47.31 RNA5-8SN2-201 rRNA uterus (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 5.00 0.06 0.02 100.0 RNA5-8SN2-201 rRNA uterus (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 121.00 1.46 0.60 100.0 RNA5-8SN2-201 rRNA uterus (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 3306.84 39.90 16.50 53.35 RNA5-8SN2-201 rRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 124.00 1.62 0.62 100.0 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 28.00 0.37 0.14 19.86 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 22.00 0.29 0.11 100.0 U2.3-201 snRNA uterus (Tissue)