ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 1968835.00 83.62 9822.64 89.8 RPL23A-208 retained intron uterus (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 376464.00 15.99 1878.20 92.73 RPL23A-208 retained intron uterus (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 11.00 8.80 0.05 100.0 MIR133A1HG-202 lncRNA uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 18840.00 10.26 93.99 62.48 RPL17-211 retained intron uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 35573.00 19.38 177.48 76.82 RPL17-211 retained intron uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 208.00 0.11 1.04 100.0 RPL17-211 retained intron uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 62195.00 33.88 310.29 93.06 RPL17-211 retained intron uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 62065.00 33.81 309.65 94.78 RPL17-211 retained intron uterus (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 14.00 36.84 0.07 60.87 ENST00000582320 lncRNA uterus (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 7.00 18.42 0.03 100.0 ENST00000582320 lncRNA uterus (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 1.00 2.63 0.00 100.0 ENST00000582320 lncRNA uterus (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 7599.00 19.16 37.91 100.0 RPL17-214 retained intron uterus (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 15517.22 39.12 77.42 55.17 RPL17-214 retained intron uterus (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 13657.04 34.43 68.14 45.43 RPL17-214 retained intron uterus (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 411422.00 98.94 2052.61 99.93 SNORD43-201 snoRNA uterus (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 68.00 0.02 0.34 100.0 SNORD43-201 snoRNA uterus (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 23.00 24.47 0.11 100.0 MIR151B-201 miRNA uterus (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 506.00 13.34 2.52 100.0 SNORD3A-201 snoRNA uterus (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 576.00 30.48 2.87 100.0 NSRP1-214 protein coding uterus (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 1066.00 56.40 5.32 87.38 NSRP1-214 protein coding uterus (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 525.00 28.81 2.62 97.04 MIR23AHG-201 lncRNA uterus (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 336.00 18.44 1.68 72.26 MIR23AHG-201 lncRNA uterus (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 461.00 25.30 2.30 94.66 MIR23AHG-201 lncRNA uterus (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 152.00 8.34 0.76 77.95 MIR23AHG-201 lncRNA uterus (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 1.00 7.69 0.00 100.0 ODAD3-204 nonsense mediated decay uterus (Tissue)