ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 123.00 29.50 0.61 45.05 SNORD121B-201 snoRNA uterus (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 137.00 18.87 0.68 100.0 SNORD127-201 snoRNA uterus (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 10403.00 94.50 51.90 100.0 SNORD42B-201 snoRNA uterus (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 90.00 2.80 0.45 100.0 RNY4P25-201 misc RNA uterus (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 205.00 73.21 1.02 100.0 SNORD121A-201 snoRNA uterus (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 6245.00 97.67 31.16 100.0 SNORD126-201 snoRNA uterus (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 562.00 44.43 2.80 100.0 SNHG12-201 retained intron uterus (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 1506.00 96.11 7.51 100.0 SMC1A-204 retained intron uterus (Tissue)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 3.00 0.24 0.01 100.0 RABGGTB-208 protein coding CDS not defined uterus (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 241.00 15.74 1.20 100.0 DDX39B-219 retained intron uterus (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 519.00 33.90 2.59 100.0 DDX39B-219 retained intron uterus (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 2170.00 83.33 10.83 100.0 RPS8-206 protein coding CDS not defined uterus (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 5680.00 25.63 28.34 100.0 RPL13-207 retained intron uterus (Tissue)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 5694.00 25.69 28.41 99.58 RPL13-207 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 449.00 0.15 2.24 31.27 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 3434.00 1.14 17.13 85.64 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 38555.00 12.79 192.35 85.84 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 2.00 0.00 0.01 100.0 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 176028.00 58.41 878.21 98.38 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 2852.00 0.95 14.23 40.2 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 35.00 0.01 0.17 100.0 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 37776.00 12.53 188.47 71.75 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 426.00 0.14 2.13 44.05 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 2020.00 0.67 10.08 50.61 EIF4A2-219 retained intron uterus (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 556.00 0.18 2.77 51.48 EIF4A2-219 retained intron uterus (Tissue)