ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 1859.00 24.46 9.27 65.09 SNORD66-201 snoRNA uterus (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 218.00 2.87 1.09 100.0 SNORD66-201 snoRNA uterus (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 1185.00 15.59 5.91 100.0 SNORD66-201 snoRNA uterus (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 8.00 34.78 0.04 100.0 U3.17-201 snoRNA uterus (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 1617.00 78.99 8.07 100.0 SNORD17-201 snoRNA uterus (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 246.00 75.69 1.23 100.0 SNORD72-201 snoRNA uterus (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 1365.00 70.76 6.81 100.0 SNORD70B-201 snoRNA uterus (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 2442.00 77.50 12.18 93.78 RNY4P18-201 misc RNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 470.00 1.49 2.34 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 5594.00 17.73 27.91 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 3471.00 11.00 17.32 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 19242.00 60.98 96.00 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 11.00 0.06 0.05 100.0 B4GALNT2-202 protein coding uterus (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 14664.00 84.86 73.16 93.99 B4GALNT2-202 protein coding uterus (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 39.00 58.21 0.19 100.0 NDE1-202 protein coding uterus (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 4.00 80.00 0.02 100.0 MIR450B-201 miRNA uterus (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 12.00 27.27 0.06 100.0 MIR887-201 miRNA uterus (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 8.00 100.00 0.04 100.0 MIR889-201 miRNA uterus (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 9.00 100.00 0.04 100.0 MIR548K-201 miRNA uterus (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 173.00 57.28 0.86 100.0 MIR320B2-201 miRNA uterus (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 1.00 100.00 0.00 100.0 MIR1271-201 miRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 205.00 1.81 1.02 100.0 SNORD100-201 snoRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 6899.00 60.75 34.42 100.0 SNORD100-201 snoRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2534.00 22.31 12.64 100.0 SNORD100-201 snoRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 813.00 7.16 4.06 100.0 SNORD100-201 snoRNA uterus (Tissue)