ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 5.00 0.88 0.02 50.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 5.00 0.88 0.02 50.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 697.00 8.78 2.89 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 14.00 0.18 0.06 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 1992.00 84.09 8.26 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 408.00 67.11 1.69 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 1165.00 67.42 4.83 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 559.00 1.10 2.32 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 91.00 0.18 0.38 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 193.00 0.38 0.80 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 1696.00 3.35 7.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 347.00 0.69 1.44 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 62.00 0.12 0.26 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 2136.00 0.08 8.85 72.65 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 2481.00 0.10 10.28 62.46 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 2871.00 0.11 11.90 95.54 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 6167.00 28.23 25.56 78.95 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 4542.00 96.05 18.82 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 8302.00 74.22 34.40 86.28 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 284.00 94.67 1.18 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 21.00 0.03 0.09 14.09 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 128.00 0.17 0.53 85.91 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 56037.00 76.06 232.22 96.27 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 7099.25 38.63 29.42 59.88 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 3395.00 18.48 14.07 94.12 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA spleen (Tissue)