ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 33.00 2.26 0.14 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 858.00 1.69 3.56 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 490.00 2.50 2.03 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 134.00 0.68 0.56 31.68 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 98.00 0.50 0.41 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 133.00 0.68 0.55 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 820.00 4.18 3.40 90.51 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 135.00 0.69 0.56 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 2284.00 7.65 9.47 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 12696.00 42.52 52.61 55.07 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 782.00 2.78 3.24 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 156.00 0.78 0.65 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 43.00 0.21 0.18 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 16317.00 81.53 67.62 94.25 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 86.00 0.43 0.36 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 52.00 0.26 0.22 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 596.00 2.16 2.47 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 9602.00 55.28 39.79 86.83 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 149.00 0.56 0.62 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 737.00 34.26 3.05 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 142.00 6.60 0.59 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 137.00 6.37 0.57 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 37.00 1.72 0.15 24.34 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 273.00 0.01 1.13 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 12411.00 76.11 51.43 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA spleen (Tissue)