ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 290.00 0.02 1.20 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 2680.00 0.19 11.11 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 326.00 0.02 1.35 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 2281.00 0.17 9.45 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 89807.00 6.52 372.17 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 327.00 0.02 1.36 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 6689.00 0.49 27.72 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 116847.00 8.48 484.22 87.98 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 14.00 0.00 0.06 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 838.00 0.06 3.47 88.77 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 85.00 0.01 0.35 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 76.00 0.01 0.31 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 7251.00 0.53 30.05 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 3852.00 0.28 15.96 85.01 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 448.53 0.03 1.86 34.03 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 2845.00 0.21 11.79 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 3484.00 0.25 14.44 64.6 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 5382.00 0.39 22.30 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 302.00 0.02 1.25 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 7366.00 16.59 30.53 100.0 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 465.94 1.05 1.93 86.61 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 90.00 0.20 0.37 100.0 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 264.00 0.59 1.09 100.0 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 65.09 0.15 0.27 12.1 SNHG5-273 lncRNA spleen (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 16067.00 36.19 66.58 99.98 SNHG5-273 lncRNA spleen (Tissue)