ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 206.00 67.99 0.85 86.92 MIR99AHG-262 lncRNA spleen (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 19.00 6.27 0.08 100.0 MIR99AHG-262 lncRNA spleen (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 22.00 46.81 0.09 95.65 MIR9-2HG-225 lncRNA spleen (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 501.00 46.30 2.08 100.0 MEG8-233 lncRNA spleen (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 85.00 7.86 0.35 100.0 MEG8-233 lncRNA spleen (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 203.00 23.39 0.84 100.0 MEG8-234 lncRNA spleen (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 121.00 13.94 0.50 100.0 MEG8-234 lncRNA spleen (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 231.00 58.78 0.96 100.0 MEG8-240 lncRNA spleen (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 150.00 8.91 0.62 100.0 ENST00000666735 lncRNA spleen (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 37.00 2.20 0.15 100.0 ENST00000666735 lncRNA spleen (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 513.00 60.50 2.13 100.0 MEG8-242 lncRNA spleen (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 150.00 0.69 0.62 100.0 MEG8-244 lncRNA spleen (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 261.00 1.21 1.08 100.0 MEG8-244 lncRNA spleen (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 20648.00 95.46 85.57 99.27 MEG8-244 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 2371.00 0.17 9.83 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 2.00 0.00 0.01 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 31085.00 2.26 128.82 98.87 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 913.46 0.07 3.79 69.31 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 6983.00 0.51 28.94 84.26 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 623956.00 45.30 2585.73 99.72 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 6998.00 0.51 29.00 80.69 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 187670.00 13.62 777.72 98.6 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 67744.00 4.92 280.74 100.0 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 124743.00 9.06 516.95 99.88 SNHG1-248 lncRNA spleen (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 180.00 0.01 0.75 100.0 SNHG1-248 lncRNA spleen (Tissue)