ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 637.00 33.60 6.47 100.0 ATP5MC3-201 protein coding OCI-LY7 (Cell line)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 43.00 69.35 0.44 100.0 CDC25A-201 protein coding OCI-LY7 (Cell line)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 27.00 56.25 0.27 100.0 BLOC1S4-201 protein coding OCI-LY7 (Cell line)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 70.00 5.84 0.71 100.0 ATAD5-201 protein coding OCI-LY7 (Cell line)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 12.00 9.16 0.12 100.0 SLITRK5-201 protein coding OCI-LY7 (Cell line)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 14.00 35.90 0.14 100.0 HASPIN-201 protein coding OCI-LY7 (Cell line)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 12.00 17.39 0.12 100.0 PRR14L-201 protein coding OCI-LY7 (Cell line)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 524.00 97.40 5.32 100.0 ATG101-201 protein coding OCI-LY7 (Cell line)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 3.00 7.89 0.03 100.0 PRICKLE1-201 protein coding OCI-LY7 (Cell line)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 25.00 2.20 0.25 100.0 MIRLET7BHG-201 lncRNA OCI-LY7 (Cell line)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 933.00 82.28 9.47 97.39 MIRLET7BHG-201 lncRNA OCI-LY7 (Cell line)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 114.00 9.04 1.16 100.0 MIR30E-201 miRNA OCI-LY7 (Cell line)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 1117.00 88.58 11.34 100.0 MIR30E-201 miRNA OCI-LY7 (Cell line)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 12.00 57.14 0.12 100.0 MIR29A-201 miRNA OCI-LY7 (Cell line)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 4.00 57.14 0.04 100.0 MIR345-201 miRNA OCI-LY7 (Cell line)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 6168.00 97.92 62.61 100.0 MIR16-2-201 miRNA OCI-LY7 (Cell line)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 1.00 100.00 0.01 100.0 MIR340-201 miRNA OCI-LY7 (Cell line)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 71.00 43.83 0.72 100.0 MIR107-201 miRNA OCI-LY7 (Cell line)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 314.00 68.56 3.19 86.74 MIR103A2-201 miRNA OCI-LY7 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 44.00 29.14 0.45 100.0 MIR425-201 miRNA OCI-LY7 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 32.00 21.19 0.32 100.0 MIR425-201 miRNA OCI-LY7 (Cell line)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 151.00 45.35 1.53 100.0 MIR210-201 miRNA OCI-LY7 (Cell line)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 1422.00 94.11 14.43 96.28 MIR378A-201 miRNA OCI-LY7 (Cell line)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 11.00 21.57 0.11 100.0 MIR361-201 miRNA OCI-LY7 (Cell line)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 105.00 95.45 1.07 100.0 MIR101-2-201 miRNA OCI-LY7 (Cell line)