ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 2.00 1.82 0.02 100.0 MIR101-2-201 miRNA OCI-LY7 (Cell line)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 2554.00 98.61 25.93 99.3 MIR26A1-201 miRNA OCI-LY7 (Cell line)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 39.00 63.93 0.40 100.0 MIR342-201 miRNA OCI-LY7 (Cell line)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 1094.00 95.46 11.11 98.47 MIR148A-201 miRNA OCI-LY7 (Cell line)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 23.00 2.01 0.23 100.0 MIR148A-201 miRNA OCI-LY7 (Cell line)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 155.00 85.64 1.57 97.48 MIR26B-201 miRNA OCI-LY7 (Cell line)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 5.00 45.45 0.05 71.43 MIR148B-201 miRNA OCI-LY7 (Cell line)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 595.00 96.91 6.04 99.17 MIRLET7G-201 miRNA OCI-LY7 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 12.00 1.08 0.12 100.0 MIR30D-201 miRNA OCI-LY7 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 1029.00 92.62 10.45 98.75 MIR30D-201 miRNA OCI-LY7 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 38.00 3.42 0.39 74.51 MIR30D-201 miRNA OCI-LY7 (Cell line)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 2.00 40.00 0.02 100.0 MIR374A-201 miRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 700.00 0.50 7.11 65.91 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 515.39 0.37 5.23 54.19 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 612.00 0.43 6.21 81.6 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 2062.00 1.46 20.93 76.29 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 2711.00 1.92 27.52 99.01 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 11178.00 7.93 113.47 81.53 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 3841.00 2.72 38.99 79.87 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 5265.00 3.73 53.45 100.0 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 794.00 0.56 8.06 100.0 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 132.00 0.09 1.34 18.75 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 158.00 0.11 1.60 100.0 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 565.59 0.40 5.74 53.06 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 16356.00 11.60 166.03 99.84 RNA5S12-201 rRNA OCI-LY7 (Cell line)