ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 39.00 0.52 0.40 100.0 RNVU1-7-201 snRNA OCI-LY7 (Cell line)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 14533.00 89.71 147.52 100.0 SNORD24-201 snoRNA OCI-LY7 (Cell line)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 3631.00 95.55 36.86 100.0 Y_RNA.389-201 misc RNA OCI-LY7 (Cell line)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 5385.00 6.54 54.66 82.33 SNORD101-201 snoRNA OCI-LY7 (Cell line)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 69780.00 84.80 708.34 98.15 SNORD101-201 snoRNA OCI-LY7 (Cell line)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 340.00 0.41 3.45 100.0 SNORD101-201 snoRNA OCI-LY7 (Cell line)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 95.00 0.12 0.96 100.0 SNORD101-201 snoRNA OCI-LY7 (Cell line)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 66947.00 96.61 679.58 100.0 SNORD37-201 snoRNA OCI-LY7 (Cell line)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 8441.00 56.85 85.68 93.01 SNORD59A-201 snoRNA OCI-LY7 (Cell line)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 46.00 19.49 0.47 100.0 SNORA7B-201 snoRNA OCI-LY7 (Cell line)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 1225.00 82.60 12.43 100.0 SNORD14D-201 snoRNA OCI-LY7 (Cell line)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 52.00 2.24 0.53 100.0 Y_RNA.555-201 misc RNA OCI-LY7 (Cell line)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 733.00 87.57 7.44 92.32 MIR25-201 miRNA OCI-LY7 (Cell line)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 6.00 54.55 0.06 100.0 MIR99B-201 miRNA OCI-LY7 (Cell line)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 1.00 50.00 0.01 100.0 MIR23B-201 miRNA OCI-LY7 (Cell line)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 2.00 100.00 0.02 100.0 MIR199B-201 miRNA OCI-LY7 (Cell line)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 76.00 98.70 0.77 100.0 MIR30B-201 miRNA OCI-LY7 (Cell line)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 4.00 80.00 0.04 100.0 MIR181D-201 miRNA OCI-LY7 (Cell line)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 1.00 100.00 0.01 100.0 MIR215-201 miRNA OCI-LY7 (Cell line)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 17.00 0.09 0.17 100.0 MIR181A2-201 miRNA OCI-LY7 (Cell line)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 4964.00 98.75 50.39 99.8 MIR191-201 miRNA OCI-LY7 (Cell line)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1.00 50.00 0.01 100.0 MIR181C-201 miRNA OCI-LY7 (Cell line)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 1.00 50.00 0.01 100.0 MIR181C-201 miRNA OCI-LY7 (Cell line)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 8.00 100.00 0.08 100.0 MIR194-1-201 miRNA OCI-LY7 (Cell line)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 23.00 71.88 0.23 79.31 MIR128-2-201 miRNA OCI-LY7 (Cell line)