ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 3841.00 2.72 38.99 79.87 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 5265.00 3.73 53.45 100.0 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 132.00 0.09 1.34 18.75 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 1185.00 0.84 12.03 58.75 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 158.00 0.11 1.60 100.0 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 565.59 0.40 5.74 53.06 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 183.00 4.37 1.86 100.0 Y_RNA.14-201 misc RNA OCI-LY7 (Cell line)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 101.00 3.33 1.03 100.0 RNU5E-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 2533.00 3.01 25.71 18.47 RNA5SP370-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 1134.00 58.09 11.51 100.0 SNORA31-201 snoRNA OCI-LY7 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 5204.00 6.19 52.83 100.0 RNA5SP389-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 3237.00 3.85 32.86 90.8 RNA5SP389-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 4607.00 5.48 46.77 100.0 RNA5SP389-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 2778.00 3.30 28.20 74.16 RNA5SP389-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 769.00 2.05 7.81 100.0 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 1182.00 3.15 12.00 67.58 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 591.00 1.57 6.00 40.56 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 440.61 1.17 4.47 33.95 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 579.00 1.54 5.88 56.1 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 142.00 0.38 1.44 100.0 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 1748.32 4.66 17.75 68.67 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 761.83 2.03 7.73 42.61 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 842.00 2.24 8.55 58.39 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 594.00 1.58 6.03 38.77 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1615.00 4.30 16.39 80.07 RNU5A-1-201 snRNA OCI-LY7 (Cell line)