ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 966.00 0.19 9.81 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 92358.00 18.50 937.53 98.19 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 13.00 0.00 0.13 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 134.00 0.03 1.36 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 2305.00 0.46 23.40 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 239.00 0.05 2.43 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 126.00 0.03 1.28 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 57.00 0.01 0.58 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 372.00 0.07 3.78 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 575.00 0.12 5.84 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 206635.00 41.38 2097.55 98.24 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 146.00 0.03 1.48 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 12620.00 2.53 128.11 93.07 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 249.00 0.05 2.53 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 55.00 0.01 0.56 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 10839.00 2.17 110.03 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 639.00 0.13 6.49 75.35 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 103.63 0.02 1.05 42.12 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 96.00 0.02 0.97 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 570.00 0.11 5.79 62.98 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 140.00 0.03 1.42 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 96.00 0.02 0.97 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 240.00 0.05 2.44 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 2.00 22.22 0.02 100.0 SNHG14-315 lncRNA OCI-LY7 (Cell line)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 4.00 44.44 0.04 100.0 SNHG14-315 lncRNA OCI-LY7 (Cell line)