ENCFF521RDG

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 611.00 24.49 6.20 75.25 ENST00000655317 lncRNA OCI-LY7 (Cell line)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 43.00 1.72 0.44 100.0 ENST00000655317 lncRNA OCI-LY7 (Cell line)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 68.00 4.84 0.69 69.39 LINC01962-202 lncRNA OCI-LY7 (Cell line)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 260.00 18.49 2.64 100.0 LINC01962-202 lncRNA OCI-LY7 (Cell line)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 216.00 15.36 2.19 100.0 LINC01962-202 lncRNA OCI-LY7 (Cell line)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 1.00 25.00 0.01 100.0 SNHG14-241 lncRNA OCI-LY7 (Cell line)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 1.00 33.33 0.01 100.0 SNHG14-261 lncRNA OCI-LY7 (Cell line)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 1.00 33.33 0.01 100.0 SNHG14-261 lncRNA OCI-LY7 (Cell line)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 4.00 0.15 0.04 100.0 LIMD1-AS1-204 lncRNA OCI-LY7 (Cell line)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 1.00 0.04 0.01 100.0 LIMD1-AS1-204 lncRNA OCI-LY7 (Cell line)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 397.00 14.57 4.03 80.2 LIMD1-AS1-204 lncRNA OCI-LY7 (Cell line)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 8.00 10.26 0.08 100.0 MIR9-2HG-225 lncRNA OCI-LY7 (Cell line)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 3108.00 87.38 31.55 100.0 SNHG17-252 lncRNA OCI-LY7 (Cell line)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 224.00 2.83 2.27 100.0 ENST00000666735 lncRNA OCI-LY7 (Cell line)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 851.00 10.77 8.64 100.0 ENST00000666735 lncRNA OCI-LY7 (Cell line)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 1.00 50.00 0.01 100.0 MEG8-244 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 1283.00 0.26 13.02 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 346.00 0.07 3.51 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 5.00 0.00 0.05 100.0 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 1719.00 0.34 17.45 98.28 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 149.96 0.03 1.52 60.96 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 996.00 0.20 10.11 87.91 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 96746.00 19.38 982.07 96.72 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 64.00 0.01 0.65 55.17 SNHG1-248 lncRNA OCI-LY7 (Cell line)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 28365.00 5.68 287.93 99.64 SNHG1-248 lncRNA OCI-LY7 (Cell line)