ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 179.00 4.13 0.15 100.0 RNVU1-7-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 20289.00 80.76 17.00 100.0 SNORD24-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 561.00 80.95 0.47 100.0 Y_RNA.389-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 657.00 0.35 0.55 100.0 SNORD101-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 175367.00 92.81 146.91 99.16 SNORD101-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 196.00 0.10 0.16 100.0 SNORD101-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 5384.00 2.85 4.51 83.3 SNORD101-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 224869.00 97.73 188.39 100.0 SNORD37-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 518593.00 93.57 434.45 98.88 SNORD59A-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 5645.00 80.52 4.73 100.0 SNORA7B-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 3942.00 86.28 3.30 100.0 SNORD14D-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 102.00 13.92 0.09 100.0 Y_RNA.555-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 18993.00 87.74 15.91 89.31 MIR25-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 84519.00 93.35 70.81 96.88 MIR99B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 5787.00 45.94 4.85 80.58 MIR23B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 5969.00 47.38 5.00 81.64 MIR23B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 2669.00 81.85 2.24 100.0 MIR203A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 13194.00 17.07 11.05 100.0 MIR199B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 55621.00 71.95 46.60 89.38 MIR199B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 4073.00 94.61 3.41 100.0 MIR30B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 2207.00 91.46 1.85 100.0 MIR181D-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 296.00 77.69 0.25 100.0 MIR508-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 274056.00 92.34 229.59 100.0 MIR215-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 3278.00 0.38 2.75 100.0 MIR181A2-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 229805.00 99.11 192.52 99.6 MIR191-201 miRNA hepatocyte (In vitro differentiated cells)