ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 259.00 0.52 0.22 100.0 ENST00000771298 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 44465.00 88.78 37.25 95.24 ENST00000771298 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 130.00 0.26 0.11 100.0 ENST00000771298 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 6487.00 68.75 5.43 100.0 ENST00000772672 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 18.00 0.19 0.02 100.0 ENST00000772672 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 244.00 2.59 0.20 100.0 ENST00000772672 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 378.00 48.90 0.32 100.0 ENST00000773843 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 265.00 0.02 0.22 100.0 SNHG12-223 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 930317.00 55.84 779.38 94.97 SNHG12-223 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 731230.00 43.89 612.59 99.01 SNHG12-223 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 26864.00 0.42 22.51 100.0 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 5474591.00 85.24 4586.37 86.12 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 1624.00 0.03 1.36 100.0 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 412.21 0.01 0.35 49.31 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 706.80 0.01 0.59 56.59 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 625.81 0.01 0.52 34.48 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 8864.00 0.14 7.43 77.2 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 426.00 0.01 0.36 100.0 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 287.00 49.91 0.24 100.0 ENST00000778783 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 1386.00 86.95 1.16 90.89 MIR155HG-205 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 540.00 7.26 0.45 100.0 ENST00000785178 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 245.00 5.61 0.21 70.61 ENST00000786284 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1038.00 23.76 0.87 100.0 ENST00000786284 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 102.00 2.34 0.09 41.98 ENST00000786284 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 2575.00 58.67 2.16 92.93 ENST00000788343 lncRNA hepatocyte (In vitro differentiated cells)