ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 466.00 6.45 0.39 100.0 ENST00000753088 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 338.00 4.68 0.28 100.0 ENST00000753088 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 2450.82 4.48 2.05 35.75 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 3909.00 7.15 3.27 100.0 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 846.00 1.55 0.71 100.0 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 499.00 0.91 0.42 100.0 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 2476.96 4.53 2.08 10.17 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 25604.64 46.83 21.45 88.65 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 421.38 0.77 0.35 27.31 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 631.18 1.15 0.53 30.03 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 5372.00 9.83 4.50 100.0 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 1679.28 3.07 1.41 80.77 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 10.00 0.74 0.01 100.0 ENST00000756452 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 978.00 31.14 0.82 100.0 ENST00000760093 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 174.00 5.54 0.15 100.0 ENST00000760093 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 509991.00 92.41 427.25 95.09 SNHG14-356 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 40590.00 47.21 34.00 93.86 LINC02806-241 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 329.00 0.38 0.28 100.0 LINC02806-241 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 41.00 0.05 0.03 100.0 LINC02806-241 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 27905.00 32.46 23.38 74.53 LINC02806-241 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 918.00 87.60 0.77 100.0 EHBP1-AS1-210 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 2933.00 65.08 2.46 100.0 ENST00000770398 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 603.00 13.38 0.51 100.0 ENST00000770398 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 42.00 0.93 0.04 100.0 ENST00000770398 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 74.00 0.15 0.06 100.0 ENST00000771298 lncRNA hepatocyte (In vitro differentiated cells)