ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 709.00 0.45 0.59 100.0 ENST00000651540 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 238.00 0.15 0.20 100.0 ENST00000651540 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 401.00 0.25 0.34 100.0 ENST00000651540 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 33539.00 21.07 28.10 57.07 ENST00000651540 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 833.00 0.52 0.70 100.0 ENST00000651540 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 73298.00 46.04 61.41 80.03 ENST00000651540 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 2063.00 1.28 1.73 100.0 MIRLET7A1HG-203 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 1520.00 93.60 1.27 100.0 MEG8-225 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 878570.00 85.59 736.03 100.0 SNHG29-232 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 671.00 0.07 0.56 100.0 SNHG29-232 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 173.00 0.02 0.14 100.0 SNHG29-232 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 14.00 0.00 0.01 100.0 SNHG29-232 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 77867.00 7.59 65.23 100.0 SNHG29-232 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 56753.00 5.53 47.55 100.0 SNHG29-232 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_463_540_+ 463–540 2.00 0.00 0.00 100.0 SNHG29-232 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 1597.00 0.53 1.34 100.0 SNHG14-234 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 110797.00 36.60 92.82 97.24 SNHG14-234 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 244.00 0.08 0.20 100.0 SNHG14-234 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 28955.00 9.56 24.26 100.0 SNHG14-234 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 44183.00 14.59 37.01 100.0 SNHG14-234 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 69559.00 22.98 58.27 97.68 SNHG14-234 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 4718.00 7.06 3.95 38.34 ENST00000655317 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 9657.00 14.46 8.09 100.0 ENST00000655317 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 10552.00 15.80 8.84 60.79 ENST00000655317 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 8379.00 12.55 7.02 100.0 ENST00000655317 lncRNA hepatocyte (In vitro differentiated cells)