ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 1779.00 32.06 1.49 100.0 MT-TI-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 760.00 13.70 0.64 86.56 MT-TI-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 179.00 0.40 0.15 100.0 MT-TQ-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 22996.00 51.18 19.27 84.63 MT-TQ-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 4432.30 9.86 3.71 61.77 MT-TQ-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 5265.94 11.72 4.41 47.4 MT-TQ-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 558.00 7.61 0.47 100.0 MT-TM-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 2242.00 30.57 1.88 85.31 MT-TM-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 497.00 28.56 0.42 100.0 MT-TC-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 22300.00 12.58 18.68 81.69 MT-TY-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 963.00 0.54 0.81 100.0 MT-TY-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 2971.00 1.68 2.49 100.0 MT-TY-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 30349.00 17.12 25.43 82.81 MT-TY-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 24.00 0.01 0.02 100.0 MT-TY-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 100890.00 56.90 84.52 100.0 MT-TY-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 60.00 5.48 0.05 100.0 MT-TD-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 9696.00 33.97 8.12 100.0 MT-TK-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 129.00 0.45 0.11 100.0 MT-TK-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 7464.00 26.15 6.25 100.0 MT-TK-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 1119.00 3.92 0.94 100.0 MT-TK-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 1066.00 19.32 0.89 100.0 MT-TS2-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 143.00 2.59 0.12 100.0 MT-TS2-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 911.00 16.51 0.76 71.12 MT-TS2-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 924.00 9.29 0.77 100.0 MT-TL2-201 Mt tRNA hepatocyte (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 406.00 0.15 0.34 25.47 MT-TE-201 Mt tRNA hepatocyte (In vitro differentiated cells)