ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 4790.00 80.86 4.01 89.6 MIR532-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 343.00 80.14 0.29 100.0 MIR15B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 2.00 100.00 0.00 100.0 MIR150-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 1005.00 47.21 0.84 100.0 MIR542-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 230.00 2.68 0.19 100.0 MIR500A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 6932.00 80.76 5.81 100.0 MIR500A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 1789.00 1.04 1.50 100.0 MIR30A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 17934.00 10.44 15.02 88.89 MIR30A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 142333.00 82.89 119.24 98.45 MIR30A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 6287.00 3.66 5.27 100.0 MIR30A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1586.00 0.30 1.33 100.0 MIR27B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 489865.00 91.72 410.39 93.71 MIR27B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 821.00 86.79 0.69 100.0 MIR196A2-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 1444.00 84.54 1.21 100.0 MIR577-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 243.00 80.73 0.20 89.34 MIR654-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 2109.00 93.15 1.77 95.3 MIR204-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 6516.00 89.64 5.46 100.0 MIR152-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 376.00 59.87 0.31 100.0 MIR138-1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 11861.00 94.00 9.94 100.0 MIR30C1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 798.00 81.35 0.67 100.0 MIR660-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 4489.00 12.83 3.76 100.0 MIR125B1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 25555.00 73.02 21.41 90.18 MIR125B1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 3.00 30.00 0.00 100.0 MIR493-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 3.00 30.00 0.00 100.0 MIR493-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 149118.28 64.72 124.92 70.69 MIR182-201 miRNA hepatocyte (In vitro differentiated cells)