ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 319.00 67.44 0.27 77.62 MIR149-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 632.00 7.88 0.53 100.0 MIR181C-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 6939.00 86.50 5.81 96.42 MIR181C-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 54399.00 82.70 45.57 100.0 MIR194-1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 1730.00 84.97 1.45 87.29 MIR128-2-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 2790.00 87.32 2.34 94.32 MIR99A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 827.00 1.10 0.69 100.0 MIR28-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 65907.00 87.59 55.21 94.37 MIR28-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 3000.00 3.99 2.51 82.83 MIR28-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 7449.00 67.31 6.24 100.0 MIR183-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 150.00 14.23 0.13 100.0 MIR145-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 684.00 64.90 0.57 100.0 MIR145-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 37306.00 97.40 31.25 98.6 MIR186-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 16182.00 89.89 13.56 100.0 MIR200B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 1172.00 56.92 0.98 100.0 MIR218-1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 62384.00 92.11 52.26 96.49 MIR181B2-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 4.00 80.00 0.00 100.0 MIR495-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 263969.00 86.11 221.14 86.53 MIR10B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 374.00 7.80 0.31 100.0 MIR130B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 2302.88 48.05 1.93 65.82 MIR130B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 1930.33 40.27 1.62 45.75 MIR130B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 74511.00 53.40 62.42 100.0 MIR199A1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 45.00 76.27 0.04 100.0 MIR487B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 4699.36 43.31 3.94 44.65 MIR93-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 5527.83 50.94 4.63 59.92 MIR93-201 miRNA hepatocyte (In vitro differentiated cells)