ENCFF511CAA

Library Details

Organism: Homo Sapiens
Biosample: neuronal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR291IZK
Description: Part of ENCODE experiment ENCSR291IZK.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 9962.00 75.25 76.99 99.64 NOP56-217 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 40.00 0.32 0.31 18.87 RABGGTB-213 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 1700.00 13.60 13.14 100.0 RABGGTB-213 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 16.00 0.13 0.12 100.0 RABGGTB-213 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 172.00 1.38 1.33 81.13 RABGGTB-213 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 22.00 0.18 0.17 100.0 RABGGTB-213 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 1174.00 9.39 9.07 100.0 RABGGTB-213 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 111.00 1.69 0.86 100.0 GNL3-211 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 3129.00 47.57 24.18 100.0 GNL3-211 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 4650.00 28.60 35.94 100.0 RPL5-205 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 89.00 4.69 0.69 100.0 ZBED9-AS1-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 198.00 17.08 1.53 100.0 RPS3A-206 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 948.00 33.03 7.33 100.0 COX7C-203 protein coding neuronal stem cell (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 30.00 0.34 0.23 100.0 RACK1-229 protein coding neuronal stem cell (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 454.91 5.13 3.52 56.86 RACK1-229 protein coding neuronal stem cell (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 967.00 10.90 7.47 49.59 RACK1-229 protein coding neuronal stem cell (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 313.50 3.53 2.42 40.98 RACK1-229 protein coding neuronal stem cell (In vitro differentiated cells)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 27.00 0.80 0.21 75.0 RACK1-230 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 82.00 2.42 0.63 81.19 RACK1-230 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 21.00 3.28 0.16 100.0 RNA5SP486-201 rRNA pseudogene neuronal stem cell (In vitro differentiated cells)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1064.00 80.97 8.22 100.0 SCARNA5-201 scaRNA neuronal stem cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 43.00 0.07 0.33 100.0 RNY4-201 misc RNA neuronal stem cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 4479.00 6.84 34.62 63.41 RNY4-201 misc RNA neuronal stem cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 32.00 0.05 0.25 100.0 RNY4-201 misc RNA neuronal stem cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 95.00 0.15 0.73 51.35 RNY4-201 misc RNA neuronal stem cell (In vitro differentiated cells)