ENCFF511CAA

Library Details

Organism: Homo Sapiens
Biosample: neuronal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR291IZK
Description: Part of ENCODE experiment ENCSR291IZK.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 1450.00 2.93 11.21 68.01 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 5794.00 11.72 44.78 99.06 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 2893.00 5.85 22.36 61.16 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 731.00 1.48 5.65 100.0 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 8695.00 17.59 67.20 85.28 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 20.00 1.01 0.15 100.0 RPS8-207 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 1.00 0.04 0.01 100.0 RPL7A-206 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 742.00 27.50 5.73 100.0 RPL7A-206 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 772.00 28.61 5.97 100.0 RPL7A-206 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 61.00 0.48 0.47 98.39 RPL21-209 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 683.00 5.39 5.28 99.42 RPL21-209 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 2238.00 17.66 17.30 100.0 RPL21-209 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 1649.00 13.01 12.74 100.0 RPL21-209 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 333.00 2.63 2.57 100.0 RPL21-209 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 241.00 40.37 1.86 100.0 GABRE-209 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 3.00 0.01 0.02 100.0 RPL13A-212 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 5.00 0.02 0.04 100.0 RPL13A-212 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 12.00 0.04 0.09 100.0 RPL13A-212 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 24.00 0.08 0.19 100.0 RPL13A-212 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 18.00 0.06 0.14 100.0 RPL13A-212 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 358.00 1.18 2.77 100.0 RPL13A-212 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 8.00 0.11 0.06 80.0 RPL7A-207 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 2091.00 28.46 16.16 100.0 RPL7A-207 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 132.00 1.80 1.02 100.0 RPL7A-207 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 10.00 0.08 0.08 100.0 NOP56-217 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)