ENCFF511CAA

Library Details

Organism: Homo Sapiens
Biosample: neuronal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR291IZK
Description: Part of ENCODE experiment ENCSR291IZK.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 2.00 0.27 0.02 100.0 SNHG16-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 338.00 18.43 2.61 96.57 SNORD105B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 2.00 0.93 0.02 100.0 SNORD121B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 18.00 3.63 0.14 100.0 SNORD127-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 5.00 1.01 0.04 100.0 SNORD127-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 286.00 31.09 2.21 100.0 SNORD42B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 1117.00 34.64 8.63 100.0 RNY4P25-201 misc RNA neuronal stem cell (In vitro differentiated cells)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 1.00 0.54 0.01 100.0 SNORD121A-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 8.00 0.63 0.06 88.89 SNORD126-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 2.00 0.16 0.02 66.67 SNORD126-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 1.00 0.38 0.01 100.0 SNORD124-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 52530.00 97.92 405.98 100.0 SMC1A-204 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 6.00 0.10 0.05 100.0 RABGGTB-208 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 901.00 39.12 6.96 100.0 DDX39B-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 176.00 7.64 1.36 100.0 DDX39B-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 15.00 0.62 0.12 100.0 RPS8-206 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 4732.00 61.77 36.57 100.0 RPL13-207 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 15.00 0.20 0.12 100.0 RPL13-207 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 5794.00 11.72 44.78 99.06 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 2893.00 5.85 22.36 61.16 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 731.00 1.48 5.65 100.0 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 8695.00 17.59 67.20 85.28 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 436.00 0.88 3.37 95.82 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 3505.00 7.09 27.09 54.65 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 18.00 0.04 0.14 21.43 EIF4A2-219 retained intron neuronal stem cell (In vitro differentiated cells)