ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 30.00 10.64 0.12 100.0 Y_RNA.555-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 4346.00 91.38 17.18 92.7 MIR25-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 6987.00 92.90 27.62 96.93 MIR99B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 5171.00 59.62 20.44 84.99 MIR23B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 3083.00 35.55 12.19 81.89 MIR23B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 41257.00 91.09 163.09 100.0 MIR203A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 4007.00 81.18 15.84 92.11 MIR199B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 386.00 7.82 1.53 100.0 MIR199B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 856.00 91.94 3.38 100.0 MIR30B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 382.00 95.98 1.51 100.0 MIR181D-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 15.00 100.00 0.06 100.0 MIR215-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 121.00 0.34 0.48 100.0 MIR181A2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384872.3 ENST00000384872.3_53_74_+ 53–74 1.00 100.00 0.00 100.0 MIR206-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 52330.00 98.85 206.86 99.54 MIR191-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 104.00 61.90 0.41 67.97 MIR149-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 540.00 91.84 2.13 98.72 MIR181C-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 20.00 3.40 0.08 100.0 MIR181C-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 17.00 70.83 0.07 100.0 MIR194-1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 278.00 82.49 1.10 84.5 MIR128-2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 1866.00 81.52 7.38 89.45 MIR99A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 57779.00 91.15 228.40 94.38 MIR28-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 903.00 1.42 3.57 85.51 MIR28-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 632.00 1.00 2.50 100.0 MIR28-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 2666.00 79.18 10.54 100.0 MIR183-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 639.00 14.98 2.53 100.0 MIR145-201 miRNA esophagus squamous epithelium (Tissue)