ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 639.00 14.98 2.53 100.0 MIR145-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 5746.00 96.75 22.71 98.04 MIR186-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 7036.00 90.86 27.81 100.0 MIR200B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 33.00 51.56 0.13 100.0 MIR218-1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 3539.00 92.04 13.99 96.67 MIR181B2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 1.00 25.00 0.00 100.0 MIR495-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 475693.00 90.36 1880.39 90.84 MIR10B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 13.00 7.14 0.05 100.0 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 85.49 46.97 0.34 66.79 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 70.03 38.48 0.28 42.96 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 3133.00 40.48 12.38 100.0 MIR199A1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 10.00 58.82 0.04 100.0 MIR487B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 409.72 36.04 1.62 43.82 MIR93-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 645.65 56.79 2.55 59.18 MIR93-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 475.00 79.17 1.88 91.88 MIR532-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 129.00 91.49 0.51 100.0 MIR15B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 310.00 76.92 1.23 100.0 MIR150-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 8.00 66.67 0.03 100.0 MIR542-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 8.00 1.17 0.03 100.0 MIR500A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 520.00 76.25 2.06 100.0 MIR500A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 15603.00 47.83 61.68 95.63 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 917.00 2.81 3.62 100.0 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 178.00 0.55 0.70 100.0 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 14922.00 45.74 58.99 95.44 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 536.00 0.28 2.12 100.0 MIR27B-201 miRNA esophagus squamous epithelium (Tissue)