ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 402.00 1.51 1.59 100.0 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 5019.00 18.85 19.84 89.13 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 4112.93 15.45 16.26 36.43 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 1191.00 4.47 4.71 100.0 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 7158.90 26.89 28.30 63.41 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 806.00 3.03 3.19 100.0 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 47066.00 94.66 186.05 96.04 MIR146B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 147.00 46.37 0.58 100.0 SNHG20-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 120.00 19.17 0.47 100.0 ATP5MK-205 protein coding esophagus squamous epithelium (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 67.00 10.70 0.26 100.0 ATP5MK-205 protein coding esophagus squamous epithelium (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 11.00 3.35 0.04 100.0 LINC01556-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 344.00 46.42 1.36 100.0 ATAD3A-202 protein coding esophagus squamous epithelium (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 8.00 4.60 0.03 34.78 TMC5-202 protein coding esophagus squamous epithelium (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 11.00 18.33 0.04 100.0 ZMYM2-203 protein coding esophagus squamous epithelium (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 213.00 1.35 0.84 100.0 RNVU1-7-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 4004.00 71.79 15.83 100.0 SNORD24-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 360.00 52.63 1.42 100.0 Y_RNA.389-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 500.00 0.26 1.98 100.0 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 4557.00 2.35 18.01 83.51 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 166355.00 85.83 657.59 99.43 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 3090.00 1.59 12.21 100.0 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 31055.00 91.89 122.76 100.0 SNORD37-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 153184.00 93.59 605.53 99.08 SNORD59A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 111.00 20.11 0.44 100.0 SNORA7B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 162.00 70.74 0.64 100.0 SNORD14D-201 snoRNA esophagus squamous epithelium (Tissue)