ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 11.00 31.43 0.04 100.0 SNORD115-38-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 32.00 42.11 0.13 100.0 SNORD115-10-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 635.00 84.67 2.51 100.0 SNORD113-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 5.00 31.25 0.02 100.0 SNORD115-20-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 957.00 4.49 3.78 100.0 SNORD38A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 268.00 1.26 1.06 100.0 SNORD38A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 18979.00 89.13 75.02 100.0 SNORD38A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 1427.00 87.82 5.64 96.22 SNORD114-20-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 854.00 11.26 3.38 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 789.00 10.40 3.12 57.93 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 178.00 2.35 0.70 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 253.00 3.34 1.00 62.32 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 785.00 10.35 3.10 57.81 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 148.00 1.95 0.59 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 28.00 0.37 0.11 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 14.00 0.18 0.06 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 452.00 57.07 1.79 100.0 SNORD14C-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 33.00 67.35 0.13 100.0 SNORD115-44-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 746.00 66.49 2.95 100.0 RNA5SP77-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 5403.00 82.59 21.36 100.0 SNORD114-22-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 980.00 14.98 3.87 96.08 SNORD114-22-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 13147.00 85.63 51.97 100.0 SNORD6-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 538.00 3.50 2.13 100.0 SNORD6-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 38.00 0.83 0.15 100.0 RNY3-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 4391.00 16.49 17.36 97.95 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)