ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1983.00 1.92 7.84 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 990.00 0.96 3.91 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 5499.77 5.34 21.74 42.62 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 1536.00 1.49 6.07 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 505.00 0.49 2.00 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 2085.86 2.02 8.25 60.85 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 530.00 0.51 2.10 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 970.00 0.94 3.83 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 2412.04 2.34 9.53 58.3 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 1693.00 79.08 6.69 100.0 SNORD114-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 214.00 10.00 0.85 100.0 SNORD114-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 602.00 2.29 2.38 100.0 Y_RNA.234-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 2916.00 3.02 11.53 100.0 RNA5S9-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 215.00 1.11 0.85 100.0 RNA5SP141-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 177.00 81.19 0.70 100.0 SNORD114-15-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 253.00 55.97 1.00 100.0 ENST00000364722 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 7.00 13.73 0.03 100.0 SNORD115-15-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 320.00 60.72 1.26 100.0 SNORD113-3-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 3919.00 68.01 15.49 100.0 SNORD52-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 791.00 35.06 3.13 77.02 SNORD117-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 236.00 10.46 0.93 31.81 SNORD117-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 6.00 0.70 0.02 100.0 SNORD114-3-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 109.00 12.70 0.43 100.0 SNORD114-3-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 647.00 75.41 2.56 96.42 SNORD114-3-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 86.00 1.17 0.34 100.0 RNA5SP298-201 rRNA pseudogene esophagus squamous epithelium (Tissue)