ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 3.00 0.33 0.01 75.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 394.00 2.14 1.56 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 9.00 0.05 0.04 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 297.00 26.17 1.17 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 120.00 4.79 0.47 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 42.00 4.04 0.17 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 75.00 0.07 0.30 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 84.00 0.08 0.33 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 278.00 0.27 1.10 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 772.00 0.75 3.05 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 1016.00 0.99 4.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 58.00 0.06 0.23 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 3185.00 0.18 12.59 97.37 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 2356.00 0.14 9.31 57.38 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 2196.00 0.13 8.68 66.97 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 7247.00 34.23 28.65 80.56 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 3503.00 87.79 13.85 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 820.00 23.81 3.24 92.66 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 207.00 93.24 0.82 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 24.00 0.01 0.09 23.53 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 78.00 0.05 0.31 76.47 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 102214.00 60.15 404.05 94.23 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 6597.22 33.83 26.08 70.79 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 921.00 4.72 3.64 64.27 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 3326.90 17.06 13.15 35.16 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA esophagus squamous epithelium (Tissue)