ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 37.00 0.65 0.15 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 41.00 0.04 0.16 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 64.00 0.15 0.25 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 38.00 0.09 0.15 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 52.00 0.12 0.21 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 531.00 1.21 2.10 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 6668.00 15.19 26.36 99.85 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 60.00 0.14 0.24 4.36 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 35.00 0.19 0.14 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1450.00 7.73 5.73 48.2 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 21.00 0.13 0.08 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 543.00 1.40 2.15 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 34.00 0.09 0.13 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 277.00 0.71 1.09 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 563.00 1.45 2.23 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 26197.00 67.32 103.56 97.98 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 20.00 0.14 0.08 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 15980.00 44.25 63.17 71.73 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 25.00 0.12 0.10 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 189.00 0.90 0.75 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 178.00 0.84 0.70 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 17141.00 81.34 67.76 94.72 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 650.00 0.04 2.57 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 1377.00 20.52 5.44 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 1.00 0.11 0.00 25.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA esophagus squamous epithelium (Tissue)